A PROPERTY-GUIDED DIFFUSION MODEL FOR GENERATING MOLECULAR GRAPHS

Document Type

Conference Proceeding

Publication Title

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

Abstract

Inverse molecular generation is an essential task for drug discovery, and generative models offer a very promising avenue, especially when diffusion models are used. Despite their great success, existing methods are inherently limited by the lack of a semantic latent space that can not be navigated and perform targeted exploration to generate molecules with desired properties. Here, we present a property-guided diffusion model for generating desired molecules, which incorporates a sophisticated diffusion process capturing intricate interactions of nodes and edges within molecular graphs and leverages a time-dependent molecular property classifier to integrate desired properties into the diffusion sampling process. Furthermore, we extend our model to a multi-property-guided paradigm. Experimental results underscore the competitiveness of our approach in molecular generation, highlighting its superiority in generating desired molecules without the need for additional optimization steps.

First Page

2365

Last Page

2369

DOI

10.1109/ICASSP48485.2024.10447350

Publication Date

1-1-2024

Keywords

Diffusion Model, Drug Discovery, Molecular Graph Generation

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